Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Trav13d-1A0A075B606 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Mir5126-201ENSMUST00000175513 77 ntBASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13d-1A0A075B606 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm8825-201ENSMUST00000182565 998 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm4518-201ENSMUST00000182638 718 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms