Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Grk6-207ENSMUST00000225925 2769 ntBASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav5-1A0A075B5Z7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav5-1A0A075B5Z7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms