Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Gm11025-201ENSMUST00000140773 466 ntBASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Gm45747-201ENSMUST00000212203 999 ntBASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcb1Q9Z0H3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Mir1895-201ENSMUST00000122615 79 ntBASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Gm45612-201ENSMUST00000211320 160 ntBASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Smarcb1Q9Z0H3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Smarcb1Q9Z0H3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smarcb1Q9Z0H3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smarcb1Q9Z0H3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smarcb1Q9Z0H3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smarcb1Q9Z0H3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smarcb1Q9Z0H3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smarcb1Q9Z0H3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smarcb1Q9Z0H3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.97■□□□□ 0.15
Smarcb1Q9Z0H3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smarcb1Q9Z0H3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smarcb1Q9Z0H3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smarcb1Q9Z0H3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Gm27494-201ENSMUST00000184735 189 ntBASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Chchd1-203ENSMUST00000224633 557 ntBASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.96■□□□□ 0.15
Smarcb1Q9Z0H3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Smarcb1Q9Z0H3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Smarcb1Q9Z0H3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms