Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcsQ9WU84 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcsQ9WU84 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcsQ9WU84 Gm10013-201ENSMUST00000106074 672 ntBASIC12.05□□□□□ -0.48
CcsQ9WU84 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.05□□□□□ -0.48
CcsQ9WU84 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcsQ9WU84 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.05□□□□□ -0.48
CcsQ9WU84 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CcsQ9WU84 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcsQ9WU84 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
CcsQ9WU84 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcsQ9WU84 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CcsQ9WU84 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcsQ9WU84 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcsQ9WU84 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
CcsQ9WU84 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcsQ9WU84 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
CcsQ9WU84 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcsQ9WU84 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
CcsQ9WU84 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.04□□□□□ -0.48
CcsQ9WU84 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
CcsQ9WU84 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CcsQ9WU84 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.04□□□□□ -0.48
CcsQ9WU84 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.04□□□□□ -0.48
CcsQ9WU84 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CcsQ9WU84 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CcsQ9WU84 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
CcsQ9WU84 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.04□□□□□ -0.48
CcsQ9WU84 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CcsQ9WU84 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CcsQ9WU84 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcsQ9WU84 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CcsQ9WU84 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CcsQ9WU84 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CcsQ9WU84 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
CcsQ9WU84 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CcsQ9WU84 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.03□□□□□ -0.48
CcsQ9WU84 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CcsQ9WU84 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CcsQ9WU84 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.03□□□□□ -0.48
CcsQ9WU84 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.03□□□□□ -0.48
CcsQ9WU84 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcsQ9WU84 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
CcsQ9WU84 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CcsQ9WU84 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CcsQ9WU84 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CcsQ9WU84 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CcsQ9WU84 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
CcsQ9WU84 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CcsQ9WU84 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms