Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Shroom3Q9QXN0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shroom3Q9QXN0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.47■□□□□ 0.07
Shroom3Q9QXN0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shroom3Q9QXN0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shroom3Q9QXN0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.46■□□□□ 0.07
Shroom3Q9QXN0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Shroom3Q9QXN0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Shroom3Q9QXN0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Shroom3Q9QXN0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Shroom3Q9QXN0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Shroom3Q9QXN0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.45■□□□□ 0.06
Shroom3Q9QXN0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Asic1-205ENSMUST00000228185 1818 ntBASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.44■□□□□ 0.06
Shroom3Q9QXN0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom3Q9QXN0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms