Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm4Q9QXA5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm4Q9QXA5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm4Q9QXA5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm4Q9QXA5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm4Q9QXA5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm4Q9QXA5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm4Q9QXA5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm4Q9QXA5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Lsm4Q9QXA5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm4Q9QXA5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm4Q9QXA5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm4Q9QXA5 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm4Q9QXA5 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms