Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Gm44454-201ENSMUST00000198541 138 ntBASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Gm34391-201ENSMUST00000203706 907 ntBASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a2Q9JLR1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Gm24589-201ENSMUST00000116692 94 ntBASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Gm27741-201ENSMUST00000185060 237 ntBASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a2Q9JLR1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a2Q9JLR1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms