Protein–RNA interactions for Protein: Q9JK54

Msgn1, Mesogenin-1, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msgn1Q9JK54 Gm13453-201ENSMUST00000118708 357 ntBASIC16.65■□□□□ 0.26
Msgn1Q9JK54 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msgn1Q9JK54 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msgn1Q9JK54 Gm17837-201ENSMUST00000186435 985 ntBASIC16.65■□□□□ 0.26
Msgn1Q9JK54 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msgn1Q9JK54 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msgn1Q9JK54 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Msgn1Q9JK54 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Msgn1Q9JK54 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msgn1Q9JK54 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msgn1Q9JK54 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Msgn1Q9JK54 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.64■□□□□ 0.26
Msgn1Q9JK54 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Gm27989-201ENSMUST00000184721 107 ntBASIC16.64■□□□□ 0.25
Msgn1Q9JK54 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msgn1Q9JK54 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Gm5745-201ENSMUST00000183748 313 ntBASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Mir8102-201ENSMUST00000184148 139 ntBASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Gm28630-201ENSMUST00000187806 498 ntBASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Gm6888-201ENSMUST00000221983 706 ntBASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msgn1Q9JK54 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Gm5866-201ENSMUST00000177881 973 ntBASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Gm27920-201ENSMUST00000183953 96 ntBASIC16.62■□□□□ 0.25
Msgn1Q9JK54 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Gm18049-201ENSMUST00000208909 581 ntBASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msgn1Q9JK54 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msgn1Q9JK54 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msgn1Q9JK54 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msgn1Q9JK54 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msgn1Q9JK54 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msgn1Q9JK54 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msgn1Q9JK54 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msgn1Q9JK54 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Msgn1Q9JK54 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msgn1Q9JK54 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms