Protein–RNA interactions for Protein: Q9JJS6

Bco1, Beta,beta-carotene 15,15'-dioxygenase, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bco1Q9JJS6 Gm10060-201ENSMUST00000212002 111 ntBASIC14.46□□□□□ -0.09
Bco1Q9JJS6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.46□□□□□ -0.09
Bco1Q9JJS6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bco1Q9JJS6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Bco1Q9JJS6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Bco1Q9JJS6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bco1Q9JJS6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bco1Q9JJS6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Bco1Q9JJS6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Bco1Q9JJS6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Bco1Q9JJS6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Bco1Q9JJS6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Bco1Q9JJS6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Bco1Q9JJS6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Bco1Q9JJS6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.45□□□□□ -0.1
Bco1Q9JJS6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.45□□□□□ -0.1
Bco1Q9JJS6 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Bco1Q9JJS6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Sybu-209ENSMUST00000228639 4113 ntBASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.44□□□□□ -0.1
Bco1Q9JJS6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.44□□□□□ -0.1
Bco1Q9JJS6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Bco1Q9JJS6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Bco1Q9JJS6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Bco1Q9JJS6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Bco1Q9JJS6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Bco1Q9JJS6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Bco1Q9JJS6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Bco1Q9JJS6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.43□□□□□ -0.1
Bco1Q9JJS6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Bco1Q9JJS6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Bco1Q9JJS6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Bco1Q9JJS6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.43□□□□□ -0.1
Bco1Q9JJS6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.43□□□□□ -0.1
Bco1Q9JJS6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Bco1Q9JJS6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms