Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Gm42778-201ENSMUST00000199644 553 ntBASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Gm45417-201ENSMUST00000209533 758 ntBASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Flg-201ENSMUST00000050758 1488 ntBASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco4Q9JIS3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco4Q9JIS3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms