Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Gm13186-201ENSMUST00000118031 316 ntBASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Gm9987-201ENSMUST00000069768 567 ntBASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1cQ9ES64 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Gm6433-201ENSMUST00000118634 875 ntBASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1cQ9ES64 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ush1cQ9ES64 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Gm7977-201ENSMUST00000193787 748 ntBASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ush1cQ9ES64 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms