Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Gm28659-201ENSMUST00000188013 759 ntBASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Mir8098-201ENSMUST00000184011 137 ntBASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a3bpQ9EQG9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Gm5864-201ENSMUST00000202263 970 ntBASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a3bpQ9EQG9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a3bpQ9EQG9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a3bpQ9EQG9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms