Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf1Q9EPU4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf1Q9EPU4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf1Q9EPU4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf1Q9EPU4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf1Q9EPU4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf1Q9EPU4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf1Q9EPU4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf1Q9EPU4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Gm13616-201ENSMUST00000120600 222 ntBASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Gm18889-201ENSMUST00000174284 929 ntBASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Gm10313-201ENSMUST00000095320 1002 ntBASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Mxra8os-201ENSMUST00000097740 687 ntBASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf1Q9EPU4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 BC037039-201ENSMUST00000192003 2205 ntBASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Gm8597-201ENSMUST00000191525 1109 ntBASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Gm43474-201ENSMUST00000196415 774 ntBASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf1Q9EPU4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf1Q9EPU4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC21.1■□□□□ 0.97
Cpsf1Q9EPU4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf1Q9EPU4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC21.1■□□□□ 0.97
Cpsf1Q9EPU4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf1Q9EPU4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf1Q9EPU4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf1Q9EPU4 Gm15593-201ENSMUST00000122085 1008 ntBASIC21.1■□□□□ 0.97
Cpsf1Q9EPU4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf1Q9EPU4 Gm30437-201ENSMUST00000206086 1201 ntBASIC21.1■□□□□ 0.97
Cpsf1Q9EPU4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf1Q9EPU4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf1Q9EPU4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf1Q9EPU4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 Nudt18-203ENSMUST00000228768 1578 ntBASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf1Q9EPU4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 Rprl2-201ENSMUST00000157150 290 ntBASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 Gm44872-201ENSMUST00000207864 420 ntBASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC21.08■□□□□ 0.97
Cpsf1Q9EPU4 AC166341.4-201ENSMUST00000220625 123 ntBASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms