Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Mir5126-201ENSMUST00000175513 77 ntBASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Gm5364-201ENSMUST00000216789 889 ntBASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Sybu-209ENSMUST00000228639 4113 ntBASIC14.34□□□□□ -0.11
Cdc40Q9DC48 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdc40Q9DC48 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdc40Q9DC48 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdc40Q9DC48 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cdc40Q9DC48 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdc40Q9DC48 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Gm7230-201ENSMUST00000173026 815 ntBASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cdc40Q9DC48 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Gm11594-201ENSMUST00000122313 162 ntBASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Gm9172-201ENSMUST00000212092 954 ntBASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdc40Q9DC48 Gm8655-201ENSMUST00000221159 852 ntBASIC14.32□□□□□ -0.12
Cdc40Q9DC48 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms