Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Chmp5Q9D7S9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.34■□□□□ 0.69
Chmp5Q9D7S9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.34■□□□□ 0.69
Chmp5Q9D7S9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.34■□□□□ 0.69
Chmp5Q9D7S9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Chmp5Q9D7S9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp5Q9D7S9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp5Q9D7S9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.34■□□□□ 0.69
Chmp5Q9D7S9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp5Q9D7S9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.34■□□□□ 0.69
Chmp5Q9D7S9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Chmp5Q9D7S9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp5Q9D7S9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp5Q9D7S9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Chmp5Q9D7S9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp5Q9D7S9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.33■□□□□ 0.69
Chmp5Q9D7S9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp5Q9D7S9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp5Q9D7S9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp5Q9D7S9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Chmp5Q9D7S9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp5Q9D7S9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp5Q9D7S9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC19.33■□□□□ 0.69
Chmp5Q9D7S9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp5Q9D7S9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp5Q9D7S9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp5Q9D7S9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp5Q9D7S9 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.33■□□□□ 0.68
Chmp5Q9D7S9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp5Q9D7S9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp5Q9D7S9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp5Q9D7S9 Gm45605-201ENSMUST00000210265 4269 ntBASIC19.33■□□□□ 0.68
Chmp5Q9D7S9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Chmp5Q9D7S9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp5Q9D7S9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC19.33■□□□□ 0.68
Chmp5Q9D7S9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp5Q9D7S9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp5Q9D7S9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp5Q9D7S9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp5Q9D7S9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Gm9013-201ENSMUST00000132939 882 ntBASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp5Q9D7S9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Gm25406-201ENSMUST00000157599 105 ntBASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp5Q9D7S9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp5Q9D7S9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms