Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Gm16061-201ENSMUST00000122167 857 ntBASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hdhd3Q9CYW4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Gm20760-201ENSMUST00000179197 648 ntBASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Gm2274-201ENSMUST00000184539 609 ntBASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.59□□□□□ -0.39
Hdhd3Q9CYW4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hdhd3Q9CYW4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hdhd3Q9CYW4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.58□□□□□ -0.39
Hdhd3Q9CYW4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Gm26039-201ENSMUST00000158152 144 ntBASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Gm5417-201ENSMUST00000079706 384 ntBASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hdhd3Q9CYW4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms