Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ssr1Q9CY50 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.79■□□□□ 0.28
Ssr1Q9CY50 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ssr1Q9CY50 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ssr1Q9CY50 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.79■□□□□ 0.28
Ssr1Q9CY50 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ssr1Q9CY50 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ssr1Q9CY50 Gm11950-201ENSMUST00000121615 838 ntBASIC16.79■□□□□ 0.28
Ssr1Q9CY50 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ssr1Q9CY50 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.79■□□□□ 0.28
Ssr1Q9CY50 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ssr1Q9CY50 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ssr1Q9CY50 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ssr1Q9CY50 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ssr1Q9CY50 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ssr1Q9CY50 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ssr1Q9CY50 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Gm17808-201ENSMUST00000200859 894 ntBASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssr1Q9CY50 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Gm23634-201ENSMUST00000175071 91 ntBASIC16.77■□□□□ 0.28
Ssr1Q9CY50 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssr1Q9CY50 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ssr1Q9CY50 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ssr1Q9CY50 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ssr1Q9CY50 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Ssr1Q9CY50 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Ssr1Q9CY50 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Gm25016-201ENSMUST00000158399 131 ntBASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssr1Q9CY50 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.75■□□□□ 0.27
Ssr1Q9CY50 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms