Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm6659-201ENSMUST00000174752 547 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm8825-201ENSMUST00000182565 998 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm4518-201ENSMUST00000182638 718 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.2■□□□□ 0.5
Smc3Q9CW03 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc3Q9CW03 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc3Q9CW03 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.19■□□□□ 0.5
Smc3Q9CW03 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Smc3Q9CW03 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.19■□□□□ 0.5
Smc3Q9CW03 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Smc3Q9CW03 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc3Q9CW03 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc3Q9CW03 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc3Q9CW03 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.18■□□□□ 0.5
Smc3Q9CW03 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc3Q9CW03 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Smc3Q9CW03 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc3Q9CW03 Olfr129-201ENSMUST00000122318 993 ntBASIC18.18■□□□□ 0.5
Smc3Q9CW03 Rprl3-201ENSMUST00000157400 290 ntBASIC18.18■□□□□ 0.5
Smc3Q9CW03 Mir3081-201ENSMUST00000175305 84 ntBASIC18.18■□□□□ 0.5
Smc3Q9CW03 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.18■□□□□ 0.5
Smc3Q9CW03 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc3Q9CW03 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Smc3Q9CW03 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc3Q9CW03 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
Smc3Q9CW03 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc3Q9CW03 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.18■□□□□ 0.5
Smc3Q9CW03 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Smc3Q9CW03 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.17■□□□□ 0.5
Smc3Q9CW03 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Smc3Q9CW03 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc3Q9CW03 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.17■□□□□ 0.5
Smc3Q9CW03 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc3Q9CW03 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc3Q9CW03 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc3Q9CW03 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.17■□□□□ 0.5
Smc3Q9CW03 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Smc3Q9CW03 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc3Q9CW03 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc3Q9CW03 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
Smc3Q9CW03 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc3Q9CW03 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc3Q9CW03 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc3Q9CW03 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.16■□□□□ 0.5
Smc3Q9CW03 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Gm44454-201ENSMUST00000198541 138 ntBASIC18.16■□□□□ 0.5
Smc3Q9CW03 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc3Q9CW03 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc3Q9CW03 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms