Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Rprl3-201ENSMUST00000157400 290 ntBASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rer1Q9CQU3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Gm13836-201ENSMUST00000121159 501 ntBASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Olfr129-201ENSMUST00000122318 993 ntBASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rer1Q9CQU3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Mir3081-201ENSMUST00000175305 84 ntBASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.65□□□□□ -0.38
Rer1Q9CQU3 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms