Protein–RNA interactions for Protein: Q9CQL6

Mrpl35, 39S ribosomal protein L35, mitochondrial, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl35Q9CQL6 Gm6376-201ENSMUST00000209407 580 ntBASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Gm8655-201ENSMUST00000221159 852 ntBASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl35Q9CQL6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Gm6296-201ENSMUST00000222599 943 ntBASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Rps4l-201ENSMUST00000071745 943 ntBASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Sybu-209ENSMUST00000228639 4113 ntBASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl35Q9CQL6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Gm18622-201ENSMUST00000219361 595 ntBASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mrpl35Q9CQL6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mrpl35Q9CQL6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.46□□□□□ -0.58
Mrpl35Q9CQL6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mrpl35Q9CQL6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mrpl35Q9CQL6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Mrpl35Q9CQL6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Mrpl35Q9CQL6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mrpl35Q9CQL6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Mrpl35Q9CQL6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms