Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Mir1668-201ENSMUST00000184114 107 ntBASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt88Q9CPR6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Mir6404-201ENSMUST00000183699 94 ntBASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Krt88Q9CPR6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Krt88Q9CPR6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Krt88Q9CPR6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Krt88Q9CPR6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Krt88Q9CPR6 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms