Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim16Q99PP9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Gm15372-201ENSMUST00000120729 834 ntBASIC15.13■□□□□ 0.01
Trim16Q99PP9 Gm12895-201ENSMUST00000122214 226 ntBASIC15.13■□□□□ 0.01
Trim16Q99PP9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Gm44454-201ENSMUST00000198541 138 ntBASIC15.13■□□□□ 0.01
Trim16Q99PP9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim16Q99PP9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.12■□□□□ 0.01
Trim16Q99PP9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim16Q99PP9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms