Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim34aQ99PP6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34aQ99PP6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34aQ99PP6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34aQ99PP6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.98■□□□□ 0.63
Trim34aQ99PP6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34aQ99PP6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34aQ99PP6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34aQ99PP6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim34aQ99PP6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Mir449b-201ENSMUST00000104833 80 ntBASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.97■□□□□ 0.63
Trim34aQ99PP6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34aQ99PP6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34aQ99PP6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Gm7774-201ENSMUST00000200064 533 ntBASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34aQ99PP6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34aQ99PP6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms