Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.59■□□□□ 0.09
Cdh23Q99PF4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh23Q99PF4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh23Q99PF4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdh23Q99PF4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdh23Q99PF4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Cdh23Q99PF4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.58■□□□□ 0.09
Cdh23Q99PF4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdh23Q99PF4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh23Q99PF4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.57■□□□□ 0.08
Cdh23Q99PF4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh23Q99PF4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Gm18624-201ENSMUST00000220966 658 ntBASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh23Q99PF4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms