Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col25a1Q99MQ5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col25a1Q99MQ5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col25a1Q99MQ5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col25a1Q99MQ5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Col25a1Q99MQ5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Col25a1Q99MQ5 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col25a1Q99MQ5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms