Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm45328-201ENSMUST00000210942 917 ntBASIC14.6□□□□□ -0.07
Nkd1Q99MH6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd1Q99MH6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkd1Q99MH6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkd1Q99MH6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkd1Q99MH6 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.58□□□□□ -0.07
Nkd1Q99MH6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkd1Q99MH6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Gm25016-201ENSMUST00000158399 131 ntBASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd1Q99MH6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.57□□□□□ -0.08
Nkd1Q99MH6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkd1Q99MH6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms