Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-1Q99MA9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-1Q99MA9 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Gm25287-201ENSMUST00000103846 110 ntBASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Gm22918-201ENSMUST00000103855 110 ntBASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Gm10154-201ENSMUST00000084445 354 ntBASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-1Q99MA9 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.42□□□□□ -0.1
Nkx6-1Q99MA9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-1Q99MA9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-1Q99MA9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-1Q99MA9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-1Q99MA9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-1Q99MA9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-1Q99MA9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-1Q99MA9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-1Q99MA9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nkx6-1Q99MA9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx6-1Q99MA9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nkx6-1Q99MA9 Gm13223-201ENSMUST00000118609 747 ntBASIC14.42□□□□□ -0.1
Nkx6-1Q99MA9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-1Q99MA9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms