Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scrt1Q99M85 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Gm11764-201ENSMUST00000120221 623 ntBASIC13.53□□□□□ -0.24
Scrt1Q99M85 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.53□□□□□ -0.24
Scrt1Q99M85 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Gm20949-201ENSMUST00000206478 952 ntBASIC13.53□□□□□ -0.24
Scrt1Q99M85 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Scrt1Q99M85 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Scrt1Q99M85 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scrt1Q99M85 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scrt1Q99M85 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scrt1Q99M85 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scrt1Q99M85 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scrt1Q99M85 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scrt1Q99M85 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scrt1Q99M85 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scrt1Q99M85 Grk6-207ENSMUST00000225925 2769 ntBASIC13.52□□□□□ -0.24
Scrt1Q99M85 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scrt1Q99M85 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scrt1Q99M85 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.52□□□□□ -0.25
Scrt1Q99M85 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.52□□□□□ -0.25
Scrt1Q99M85 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scrt1Q99M85 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.51□□□□□ -0.25
Scrt1Q99M85 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.51□□□□□ -0.25
Scrt1Q99M85 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.51□□□□□ -0.25
Scrt1Q99M85 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms