Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.37□□□□□ -0.11
Cdca3Q99M54 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdca3Q99M54 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdca3Q99M54 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdca3Q99M54 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdca3Q99M54 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdca3Q99M54 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cdca3Q99M54 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdca3Q99M54 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cdca3Q99M54 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdca3Q99M54 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdca3Q99M54 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdca3Q99M54 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdca3Q99M54 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdca3Q99M54 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdca3Q99M54 App-207ENSMUST00000227737 2827 ntBASIC14.37□□□□□ -0.11
Cdca3Q99M54 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdca3Q99M54 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdca3Q99M54 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdca3Q99M54 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cdca3Q99M54 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Psmb5-202ENSMUST00000227257 622 ntBASIC14.36□□□□□ -0.11
Cdca3Q99M54 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.36□□□□□ -0.11
Cdca3Q99M54 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.36□□□□□ -0.11
Cdca3Q99M54 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdca3Q99M54 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Gm27397-201ENSMUST00000184997 107 ntBASIC14.35□□□□□ -0.11
Cdca3Q99M54 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.35□□□□□ -0.11
Cdca3Q99M54 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.35□□□□□ -0.11
Cdca3Q99M54 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.35□□□□□ -0.11
Cdca3Q99M54 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdca3Q99M54 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdca3Q99M54 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdca3Q99M54 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdca3Q99M54 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdca3Q99M54 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdca3Q99M54 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cdca3Q99M54 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdca3Q99M54 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdca3Q99M54 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms