Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Gm23634-201ENSMUST00000175071 91 ntBASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap3Q99LM2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm8825-201ENSMUST00000182565 998 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm4518-201ENSMUST00000182638 718 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap3Q99LM2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Rprl3-201ENSMUST00000157400 290 ntBASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cdk5rap3Q99LM2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.02■□□□□ 0.15
Cdk5rap3Q99LM2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap3Q99LM2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.01■□□□□ 0.15
Cdk5rap3Q99LM2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap3Q99LM2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap3Q99LM2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap3Q99LM2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms