Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Gm27525-201ENSMUST00000184465 107 ntBASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Gm18206-201ENSMUST00000207027 926 ntBASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha2Q91Y17 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha2Q91Y17 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Gm13597-201ENSMUST00000121239 375 ntBASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdha2Q91Y17 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdha2Q91Y17 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Gm18246-201ENSMUST00000221023 728 ntBASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha2Q91Y17 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha2Q91Y17 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.38■□□□□ 0.21
Pcdha2Q91Y17 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha2Q91Y17 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms