Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdha9Q91Y11 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha9Q91Y11 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Gm13036-201ENSMUST00000117799 748 ntBASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Mir5126-201ENSMUST00000175513 77 ntBASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Gm2651-201ENSMUST00000203560 838 ntBASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha9Q91Y11 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Gm7787-201ENSMUST00000216858 688 ntBASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdha9Q91Y11 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Gm12350-201ENSMUST00000121208 462 ntBASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Gm18733-201ENSMUST00000173950 856 ntBASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha9Q91Y11 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms