Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Gm27646-201ENSMUST00000183989 110 ntBASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Gm27459-201ENSMUST00000184860 107 ntBASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Gm43347-201ENSMUST00000200226 580 ntBASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Gm6296-201ENSMUST00000222599 943 ntBASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb1Q91Y08 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Gm44357-201ENSMUST00000195897 142 ntBASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Gm19658-201ENSMUST00000196231 138 ntBASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Gm44367-201ENSMUST00000196836 138 ntBASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Gm44350-201ENSMUST00000197197 138 ntBASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Gm44390-201ENSMUST00000197533 144 ntBASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Gm44313-201ENSMUST00000198018 138 ntBASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Gm44486-201ENSMUST00000198508 138 ntBASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Gm44314-201ENSMUST00000199263 138 ntBASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Gm44394-201ENSMUST00000199558 138 ntBASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Gm44484-201ENSMUST00000199873 138 ntBASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Gm44466-201ENSMUST00000200264 138 ntBASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Gm44359-201ENSMUST00000200671 138 ntBASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb1Q91Y08 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb1Q91Y08 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms