Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb22Q91XZ8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb22Q91XZ8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Gm27628-201ENSMUST00000184911 107 ntBASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Gm7787-201ENSMUST00000216858 688 ntBASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb22Q91XZ8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb22Q91XZ8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Gm4899-201ENSMUST00000178708 719 ntBASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb22Q91XZ8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb22Q91XZ8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb22Q91XZ8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb22Q91XZ8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb22Q91XZ8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb22Q91XZ8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb22Q91XZ8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb22Q91XZ8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms