Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Gm25990-201ENSMUST00000102440 86 ntBASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb6Q91XZ4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb6Q91XZ4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Rps4l-201ENSMUST00000071745 943 ntBASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhb6Q91XZ4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhb6Q91XZ4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb6Q91XZ4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb6Q91XZ4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Pcdhb6Q91XZ4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb6Q91XZ4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Pcdhb6Q91XZ4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhb6Q91XZ4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb6Q91XZ4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdhb6Q91XZ4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb6Q91XZ4 Gm6376-201ENSMUST00000209407 580 ntBASIC15.83■□□□□ 0.12
Pcdhb6Q91XZ4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdhb6Q91XZ4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Pcdhb6Q91XZ4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms