Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Gm25406-201ENSMUST00000157599 105 ntBASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Gm6257-201ENSMUST00000163864 910 ntBASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.78□□□□□ -0.2
Pcdhga3Q91XY5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga3Q91XY5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga3Q91XY5 App-207ENSMUST00000227737 2827 ntBASIC13.77□□□□□ -0.2
Pcdhga3Q91XY5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga3Q91XY5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga3Q91XY5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga3Q91XY5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga3Q91XY5 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.77□□□□□ -0.2
Pcdhga3Q91XY5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga3Q91XY5 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Gm15372-201ENSMUST00000120729 834 ntBASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga3Q91XY5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga3Q91XY5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms