Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Gm25911-201ENSMUST00000157621 56 ntBASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d19Q91X43 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Gm18246-201ENSMUST00000221023 728 ntBASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d19Q91X43 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Gm17968-201ENSMUST00000194902 784 ntBASIC16.06■□□□□ 0.16
Sh3d19Q91X43 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.06■□□□□ 0.16
Sh3d19Q91X43 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3d19Q91X43 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Gm10499-201ENSMUST00000174094 934 ntBASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms