Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ddx41Q91VN6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.72■□□□□ 0.43
Ddx41Q91VN6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Gm5264-201ENSMUST00000190584 848 ntBASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.71■□□□□ 0.43
Ddx41Q91VN6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx41Q91VN6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Gm27646-201ENSMUST00000183989 110 ntBASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx41Q91VN6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Gm11594-201ENSMUST00000122313 162 ntBASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms