Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Gm14722-201ENSMUST00000118943 689 ntBASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb17Q91VD8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Gm7222-201ENSMUST00000117512 906 ntBASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC16.1■□□□□ 0.17
Pcdhb17Q91VD8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Gm13183-201ENSMUST00000118615 789 ntBASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Gm9440-201ENSMUST00000119667 539 ntBASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Gm6550-201ENSMUST00000187574 993 ntBASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb17Q91VD8 Dancr-204ENSMUST00000132389 2347 ntBASIC16.08■□□□□ 0.17
Pcdhb17Q91VD8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb17Q91VD8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb17Q91VD8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.08■□□□□ 0.17
Pcdhb17Q91VD8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.08■□□□□ 0.17
Pcdhb17Q91VD8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb17Q91VD8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhb17Q91VD8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb17Q91VD8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhb17Q91VD8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb17Q91VD8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb17Q91VD8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb17Q91VD8 Gm15173-201ENSMUST00000122049 433 ntBASIC16.08■□□□□ 0.16
Pcdhb17Q91VD8 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb17Q91VD8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdhb17Q91VD8 Gm44548-201ENSMUST00000208929 192 ntBASIC16.08■□□□□ 0.16
Pcdhb17Q91VD8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhb17Q91VD8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb17Q91VD8 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhb17Q91VD8 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhb17Q91VD8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb17Q91VD8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms