Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb21Q91V48 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm25990-201ENSMUST00000102440 86 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm13884-201ENSMUST00000118103 829 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm13418-201ENSMUST00000119097 944 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm15358-201ENSMUST00000119249 520 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm7862-201ENSMUST00000121461 292 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm11452-201ENSMUST00000122376 690 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm44357-201ENSMUST00000195897 142 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm19658-201ENSMUST00000196231 138 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm44367-201ENSMUST00000196836 138 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm44350-201ENSMUST00000197197 138 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm44390-201ENSMUST00000197533 144 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm44313-201ENSMUST00000198018 138 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm44486-201ENSMUST00000198508 138 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm44314-201ENSMUST00000199263 138 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm44394-201ENSMUST00000199558 138 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm44484-201ENSMUST00000199873 138 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm44466-201ENSMUST00000200264 138 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Gm44359-201ENSMUST00000200671 138 ntBASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb21Q91V48 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 Gm7222-201ENSMUST00000117512 906 ntBASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 Gm11780-201ENSMUST00000136880 516 ntBASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb21Q91V48 Gm6089-201ENSMUST00000197666 938 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms