Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.26■□□□□ 0.03
Vsx1Q91V10 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vsx1Q91V10 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Rprl2-201ENSMUST00000157150 290 ntBASIC15.25■□□□□ 0.03
Vsx1Q91V10 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Gm43767-201ENSMUST00000198933 381 ntBASIC15.25■□□□□ 0.03
Vsx1Q91V10 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.25■□□□□ 0.03
Vsx1Q91V10 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vsx1Q91V10 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.24■□□□□ 0.03
Vsx1Q91V10 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.24■□□□□ 0.03
Vsx1Q91V10 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.24■□□□□ 0.03
Vsx1Q91V10 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
Vsx1Q91V10 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.24■□□□□ 0.03
Vsx1Q91V10 Gm27437-201ENSMUST00000183429 107 ntBASIC15.24■□□□□ 0.03
Vsx1Q91V10 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Gm7774-201ENSMUST00000200064 533 ntBASIC15.24■□□□□ 0.03
Vsx1Q91V10 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.24■□□□□ 0.03
Vsx1Q91V10 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.24■□□□□ 0.03
Vsx1Q91V10 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vsx1Q91V10 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.23■□□□□ 0.03
Vsx1Q91V10 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms