Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Mir5126-201ENSMUST00000175513 77 ntBASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Gm2213-201ENSMUST00000197485 688 ntBASIC14.11□□□□□ -0.15
Nkd2Q8VE28 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkd2Q8VE28 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkd2Q8VE28 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nkd2Q8VE28 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkd2Q8VE28 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkd2Q8VE28 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkd2Q8VE28 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkd2Q8VE28 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkd2Q8VE28 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkd2Q8VE28 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nkd2Q8VE28 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms