Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ddx39aQ8VDW0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Gm8318-201ENSMUST00000182954 872 ntBASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ddx39aQ8VDW0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx39aQ8VDW0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ddx39aQ8VDW0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx39aQ8VDW0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx39aQ8VDW0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx39aQ8VDW0 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.11■□□□□ 0.33
Ddx39aQ8VDW0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx39aQ8VDW0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx39aQ8VDW0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ddx39aQ8VDW0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx39aQ8VDW0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx39aQ8VDW0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ddx39aQ8VDW0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx39aQ8VDW0 Gm5177-201ENSMUST00000183092 997 ntBASIC17.11■□□□□ 0.33
Ddx39aQ8VDW0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.11■□□□□ 0.33
Ddx39aQ8VDW0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms