Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Gm18489-201ENSMUST00000172565 551 ntBASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Gm5682-201ENSMUST00000173402 505 ntBASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpap2Q8VC34 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Gm6550-201ENSMUST00000187574 993 ntBASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpap2Q8VC34 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Gm11764-201ENSMUST00000120221 623 ntBASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Gm15173-201ENSMUST00000122049 433 ntBASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Gm37153-201ENSMUST00000193637 231 ntBASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpap2Q8VC34 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Gm18195-201ENSMUST00000207604 706 ntBASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.91■□□□□ 0.3
Rpap2Q8VC34 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 BC037039-201ENSMUST00000192003 2205 ntBASIC16.9■□□□□ 0.3
Rpap2Q8VC34 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpap2Q8VC34 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms