Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Gm12260-201ENSMUST00000122447 411 ntBASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp40Q8R1F9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Gm10499-201ENSMUST00000174094 934 ntBASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rpp40Q8R1F9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpp40Q8R1F9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpp40Q8R1F9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpp40Q8R1F9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rpp40Q8R1F9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpp40Q8R1F9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.52■□□□□ 0.23
Rpp40Q8R1F9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpp40Q8R1F9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpp40Q8R1F9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpp40Q8R1F9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp40Q8R1F9 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms