Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Gm4204-201ENSMUST00000110798 1231 ntBASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Gm13829-201ENSMUST00000119600 138 ntBASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Gm37748-201ENSMUST00000194379 1140 ntBASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Gm38319-201ENSMUST00000194537 1266 ntBASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Gm9908-201ENSMUST00000211534 448 ntBASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx54Q8K4L0 Gm8096-201ENSMUST00000209921 1591 ntBASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 Gm12091-201ENSMUST00000146791 830 ntBASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 Gm29667-201ENSMUST00000190817 490 ntBASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx54Q8K4L0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 AC153962.4-201ENSMUST00000217878 242 ntBASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC20.11■□□□□ 0.81
Ddx54Q8K4L0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx54Q8K4L0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Gm27920-201ENSMUST00000183953 96 ntBASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx54Q8K4L0 Gm6263-201ENSMUST00000120029 1342 ntBASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms