Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Mir5130-201ENSMUST00000175160 84 ntBASIC9.74□□□□□ -0.85
Cystm1Q8K353 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC9.74□□□□□ -0.85
Cystm1Q8K353 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Il3ra-202ENSMUST00000223589 738 ntBASIC9.74□□□□□ -0.85
Cystm1Q8K353 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 AC107711.5-202ENSMUST00000226429 702 ntBASIC9.74□□□□□ -0.85
Cystm1Q8K353 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Cystm1Q8K353 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Cystm1Q8K353 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Gm18101-201ENSMUST00000215769 548 ntBASIC9.73□□□□□ -0.85
Cystm1Q8K353 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC9.73□□□□□ -0.85
Cystm1Q8K353 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Cystm1Q8K353 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Gm43509-201ENSMUST00000196551 2594 ntBASIC9.72□□□□□ -0.85
Cystm1Q8K353 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Gm12500-202ENSMUST00000186471 2428 ntBASIC9.72□□□□□ -0.85
Cystm1Q8K353 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Cystm1Q8K353 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Gm9731-201ENSMUST00000209480 747 ntBASIC9.72□□□□□ -0.85
Cystm1Q8K353 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms