Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Gm27437-201ENSMUST00000183429 107 ntBASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Gm10253-201ENSMUST00000194270 940 ntBASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Gm18057-201ENSMUST00000208220 503 ntBASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shtn1Q8K2Q9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Gm2423-201ENSMUST00000074863 733 ntBASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shtn1Q8K2Q9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shtn1Q8K2Q9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Gm24158-201ENSMUST00000175263 71 ntBASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Gm27618-201ENSMUST00000183671 60 ntBASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Gm27430-201ENSMUST00000184585 107 ntBASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Gm44333-201ENSMUST00000197168 107 ntBASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shtn1Q8K2Q9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Shtn1Q8K2Q9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Shtn1Q8K2Q9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Shtn1Q8K2Q9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms