Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox30Q8CGW4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox30Q8CGW4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox30Q8CGW4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox30Q8CGW4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox30Q8CGW4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox30Q8CGW4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox30Q8CGW4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox30Q8CGW4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox30Q8CGW4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sox30Q8CGW4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sox30Q8CGW4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Sox30Q8CGW4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sox30Q8CGW4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox30Q8CGW4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox30Q8CGW4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox30Q8CGW4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox30Q8CGW4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox30Q8CGW4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sox30Q8CGW4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox30Q8CGW4 Gm10252-201ENSMUST00000209541 832 ntBASIC16.89■□□□□ 0.29
Sox30Q8CGW4 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.89■□□□□ 0.29
Sox30Q8CGW4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.89■□□□□ 0.29
Sox30Q8CGW4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox30Q8CGW4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.89■□□□□ 0.29
Sox30Q8CGW4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox30Q8CGW4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sox30Q8CGW4 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Gm25016-201ENSMUST00000158399 131 ntBASIC16.88■□□□□ 0.29
Sox30Q8CGW4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sox30Q8CGW4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Gm12497-201ENSMUST00000138778 237 ntBASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Gm8318-201ENSMUST00000182954 872 ntBASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.87■□□□□ 0.29
Sox30Q8CGW4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox30Q8CGW4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms