Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rp1l1Q8CGM2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Gm5479-201ENSMUST00000160578 435 ntBASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Gm28631-201ENSMUST00000190740 334 ntBASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rp1l1Q8CGM2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.83■□□□□ 0.13
Rp1l1Q8CGM2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rp1l1Q8CGM2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rp1l1Q8CGM2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rp1l1Q8CGM2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.83■□□□□ 0.13
Rp1l1Q8CGM2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rp1l1Q8CGM2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rp1l1Q8CGM2 Gm11478-201ENSMUST00000117851 599 ntBASIC15.83■□□□□ 0.12
Rp1l1Q8CGM2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rp1l1Q8CGM2 Gm3436-201ENSMUST00000179930 840 ntBASIC15.83■□□□□ 0.12
Rp1l1Q8CGM2 Gm9908-201ENSMUST00000211534 448 ntBASIC15.83■□□□□ 0.12
Rp1l1Q8CGM2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rp1l1Q8CGM2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Rp1l1Q8CGM2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rp1l1Q8CGM2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rp1l1Q8CGM2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rp1l1Q8CGM2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Gm12091-201ENSMUST00000146791 830 ntBASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Gm21854-201ENSMUST00000179901 471 ntBASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Gm18062-201ENSMUST00000208020 547 ntBASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Gm18055-201ENSMUST00000208254 547 ntBASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Gm18624-201ENSMUST00000220966 658 ntBASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms